theodorakis.net: Home Page for the Theodorakis Family

This site is a “playground” in which I can practice web authoring techniques, as well as offer a potpourri of information to family, friends, or other interested websurfers. More about this site.

If you are interested in hiring someone in central Indiana with research experience in molecular and cellular biology, please check out my résumé and list of publications, or alternatively see my linkedin account.



February 1, 2010

New Recipes

Filed under: food, what's new — Nick @ 12:40 pm

I added three more recipes to my recipes page: baked macaroni and cheese, spinach soufflé, and an easy fudge recipe.

My kids seem pretty fond of the boxed macaroni and cheese dinners, so I thought I would try some “real” mac and cheese on them. I made Alton Brown’s macaroni and cheese a couple of times. I thought it was pretty good, but the kids were rather nonplussed; they still like the boxed mix better. After some experimentation, I was able to simplify the recipe and change some of the proportions to come up with something that was still home-made but had greater kid appeal.

As for the soufflé: I am fond of spinach, and had been looking for a soufflé recipe that was not too difficult but still tasty. I tried this “easy spinach soufflé” but it wasn’t what I was looking for. It tasted fine, but it was basically just a block of spinach glued together by a little milk, eggs, and cheese. If I want to eat plain spinach, I would just steam it and add a little lemon and olive oil. So played around with it, mostly by increasing the amount of ingredients that make it seem like a soufflé. I also substituted green onion for the garlic, because I thought that goes better with spinach (even thought I am quite fond of garlic).

The fudge recipe is the one my wife likes to use at holidays these days. It’s much easier than some traditional ones, but still seems to taste like fudge. This one is not original with us, but is taken straight from a recipe pamphlet by Eagle Brand® (so of course it must use a canned milk product).

January 11, 2010

Book review: Beauty in Experimentation

Filed under: books, science — Nick @ 2:50 pm

The Ten Most Beautiful Experiments, by George Johnson (Alfred A. Knopf)

In the lab it is sometimes necessary to do an experiment or other procedure in which cleverness of thinking or dexterity in procedure is not required, but rather mindless application of time, effort, or even money. We used to call this the “brute force method” of doing science. Other times a researcher may do an experiment that yields a clear answer not through raw application of effort, but rather through clever tricks in which it seems that nature herself is doing the experiment for you; the latter kind of experiments are sometimes labeled as “elegant.” Although the brute force approach is sometimes necessary, elegance in experiments (like pornography to Justice Potter Stewart) is a quality that is hard to define although is apparent when seen, and is always greatly appreciated as being part of the art of science when an experiment is called “beautiful.”

George Johnson, a science writer, columnist, and sometimes TV personality, gives readers a flavor of this type of beauty in science in his latest book, The Ten Most Beautiful Experiments. This rather slim volume has a form factor that is somewhat reminiscent of the many inspirational volumes that fill the tables of booksellers, but it is both readable and informational as well as being inspiring to those who love or do science. One may quibble over which experiments deserve to be called the “most beautiful (and even Johnson acknowledges that the book might just have well been called simply Ten Beautiful Experiments);” he seems to choose experiments that represent the span of experimental science in various ages and scientific fields, from Galileo’s experiments of falling bodies (not, as a reader might assume, Galileo’s observation of heavenly bodies, which are discoveries rather than experiments) to Millikan’s experiments on charged oil drops that determined the charge of a single electron. In the latter case, Johnson even goes so far as to scrounge up enough surplussed equipment to repeat the famous oil drop experiment himself; the description of his efforts gives us vivid feel of what Millikan must gave seen and felt when doing the experiments himself.

In some cases Johnson gives some historical or biographical background to the scientists he writes about; in others (particularly if they are well known such as Galileo) he lets the experiments speak for themselves. In any case, enough detail about the experiments is presented such that the reader has a good appreciation for what has been accomplished without so much detail as to intimidate the non-scientific reader. The result is a book that is easy, entertaining, and informative.

January 4, 2010

Book review: Rome didn’t fall in a day

Filed under: books — Nick @ 8:30 pm

Lost to the West: The Forgotten Byzantine Empire That Rescued Western Civilization, by Lars Brownworth (Crown Publishers)

When many think of the Roman Empire, they usually think of the “fall of Rome” (to the Germanic king Odoacer) in 476 A.D. to be the end the Roman Empire, after which the West went in the “dark ages” until the Renaissance. Others may acknowledge that an entity called the “Byzantine Empire” centered in Constantinople continued on for some time in slow decline until the fall of Constantinople to the Ottoman Turks. In fact the situation was more complex and more interesting. Lars Brownworth, in his book Lost to the West: The Forgotten Byzantine Empire That Rescued Western Civilization, tells an entertaining and highly readable account of this near-forgotten episode of the Roman Empire.

In reality the Roman Empire didn’t fall in 476. The capital of the Empire had been Constantinople since 330 A.D., and even before, in Diocletian’s reign, government of the Empire was divided into Eastern and Western spheres. The term “Byantine Empire” is a relatively modern invention; the people of the Empire, their allies, and their enemies continued to call them “Roman” until the end. Moreover, that the Empire existed for over a thousand years in the face of external threats from the east and the west, as well as internal threats and dissensions, belies the belief that its history was a simple long decline. Rather, the fortunes of the Empire ebbed and flowed over its long history, and was a world power even as late as the 11th century. In addition, the Empire continued to be a haven of learning and culture and a bulwark against expansion of Islam into the West. Without its preservation of culture and learning and the dissemination of such after the fall of the Empire, it is doubtful that the Renaissance would have happened at all.

Brownworth’s book is relatively short, barely more than 300 pages, and so by necessity it can hardly be a comprehensive treatment of more than 1000 years of dynamic history. Thus, serious students of history who want or need a detailed analysis of this period should look elsewhere. Nevertheless, he does give a highly entertaining account that reads more like a historical novel than a dry work of non-fiction. He does this principally by focusing on emperors and other major players in key periods of history in which the actions of such figures were important. I had never been a big fan of the “Great Man Theory” of history, but Brownworth’s accounts of men and women who made huge impacts in the history of the Empire may make me rethink this position.

I highly recommend this book to anyone with an interest in history who would like to learn about this important episode of western civilization, or even to those who may be well-versed in this history already but may want to revisit it with entertaining read.

December 31, 2009

Book review: perniciousness of positive thinking

Filed under: books — Nick @ 11:26 pm

Bright-sided: How the Relentless Promotion of Positive Thinking Has Undermined America, by Barbara Ehrenreich (Metropolitan Books)

One can hardly enter a bookstore these days without seeing a plethora of books that pledge that the reader can achieve any number of goals—money, love, health, to name a few—merely by thinking enough positive thoughts. Barbara Ehrenreich stands athwart this rising tide of pernicious positivism and shouts “Stop!” in her latest book, Bright-sided: How the Relentless Promotion of Positive Thinking Has Undermined America, which brings a badly needed breath of fresh air and dose of realism to forefront of modern culture.

Ehrenreich begins her book with some personal history: her diagnosis and treatment of breast cancer that introduced her to the world of the “pink ribbon culture” in which a kind of cheery optimism festooned with pink ribbons and kitschy bric-à-brac bothered her nearly as much as her disease did. She exposes some of the darker elements of this movement—for example, patients whose disease progress badly are made to feel as if they were to blame for not being positive enough—as well as demolishing the belief that patients’ mood could affect their outcome.

From there she traces the history of the positive thinking movement and how it infiltrated religion, business, and culture at large in addition to spawning a whole industry devoted to selling the idea that success and fortune come to those who merely wish hard enough. Although I think she may have slightly overstated her case that the pervasiveness of the positive thinking culture was a major contributor to the financial collapse of the 2000’s—after all, speculative bubbles that collapse have existed at least since the Dutch tulip mania of the 17th century—she makes a compelling case that such thinking has gone beyond silly and into the harmful.

December 25, 2009

Christmas 2009

Filed under: Uncategorized, faith and religion — Nick @ 4:47 pm
Icon of the Nativity of Christ

Wishing everyone a very merry and blessed Christmas and a Happy New Year!

The Nativity Sermon of St. John Chrysostom (ca. 347–407 AD):

I behold a new and wondrous mystery!

My ears resound to the shepherd’s song, piping no soft melody, but loudly chanting a heavenly hymn!

The angels sing!

The archangels blend their voices in harmony!

The cherubim resound their joyful praise!

The Seraphim exalt His glory!

All join to praise this holy feast, beholding the Godhead herein… on earth and man in heaven. He who is above now, for our salvation, dwells here below; and we, who were lowly, are exalted by divine mercy!

Today Bethlehem resembles heaven, hearing from the stars the singing of angelic voices and, in place of the sun, witnessing the rising of the Sun of Justice!

Ask not how this is accomplished, for where God wills, the order of nature is overturned. For He willed He had the powers He descended. He saved. All things move in obedience to God.

Today He Who Is, is born ! And He Who Is becomes what He was not! For when He was God, He became man-while not relinquishing the Godhead that is His…

And so the kings have come, and they have seen the heavenly King that has come upon the earth, not bringing with Him angels, nor archangels, nor thrones, nor dominions, nor powers, nor principalities, but, treading a new and solitary path, He has come forth from a spotless womb.

Yet He has not forsaken His angels, nor left them deprived of His care, nor because of His incarnation has He ceased being God. And behold kings have come, that they might serve the Leader of the Hosts of Heaven; Women, that they might adore Him Who was born of a woman so that He might change the pains of childbirth into joy; Virgins, to the Son of the Virgin…

Infants, that they may adore Him who became a little child, so that out of the mouths of infants He might perfect praise; Children, to the Child who raised up martyrs through the rage of Herod; Men, to Him who became man that He might heal the miseries of His servants;

Shepherds, to the Good Shepherd who was laid down His life for His sheep;

Priests, to Him who has become a High Priest according to the order of Melchizedek;

Servants, to Him who took upon Himself the form of a servant, that He might bless our stewardship with the reward of freedom (Philippians 2:7);

Fishermen, to the Fisher of humanity;

Publicans, to Him who from among them named a chosen evangelist;

Sinful women, to Him who exposed His feet to the tears of the repentant woman;

And that I may embrace them all together, all sinners have come, that they may look upon the Lamb of God who takes away the sins of the world! Since, therefore, all rejoice, I too desire to rejoice! I too wish to share the choral dance, to celebrate the festival! But I take my part, not plucking the harp nor with the music of the pipes nor holding a torch, but holding in my arms the cradle of Christ!

For this is all my hope!

This is my life!

This is my salvation!

This is my pipe, my harp!

And bearing it I come, and having from its power received the gift of speech, I too, with the angels and shepherds, sing:

“Glory to God in the Highest! and on earth peace to men of good will! ”

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